Open data, open source and open standards in chemistry: The Blue Obelisk five years on

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dc.contributor.author O'Boyle, Noel M.
dc.contributor.author Guha, Rajarshi
dc.contributor.author Willighagen, Egon L.
dc.contributor.author Adams, Samuel E.
dc.contributor.author Alvarsson, Jonathan
dc.contributor.author Bradley, Jean-Claude
dc.contributor.author Filippov, Igor V.
dc.contributor.author Hanson, Robert M.
dc.contributor.author Hanwell, Marcus D.
dc.contributor.author Hutchison, Geoffrey R.
dc.contributor.author James, Craig A.
dc.contributor.author Jeliazkova, Nina
dc.contributor.author Lang, Andrew S. I. D.
dc.contributor.author Langner, Karol M.
dc.contributor.author Lonie, David C.
dc.contributor.author Lowe, Daniel M.
dc.contributor.author Pansanel, Jérôme
dc.contributor.author Pavlov, Dmitry
dc.contributor.author Spjuth, Ola
dc.contributor.author Steinbeck, Christoph
dc.contributor.author Tenderholt, Adam L.
dc.contributor.author Theisen, Kevin J.
dc.contributor.author Murray-Rust, Peter
dc.date.accessioned 2011-11-30T15:59:33Z
dc.date.available 2011-11-30T15:59:33Z
dc.date.copyright 2011
dc.date.issued 2011-10-14
dc.identifier.citation O'Boyle, NM; Guha, R; Willighagen, EL; Adams, SE; Alvarsson, J; Bradley, JC; Filippov, IV; Hanson, RM; Hanwell, MD; Hutchison, GR; James, CA; Jeliazkova, N; Lang, ASID; Langner, KM; Lonie, DC; Lowe, DM; Pansanel, J; Pavlov, D; Spjuth, O; Steinbeck, C; Tenderholt, AL; Theisen, KJ; Murray-Rust, P (2011) 'Open Data, Open Source and Open Standards in chemistry: The Blue Obelisk five years on'. Journal of cheminformatics, 3:33. doi:10.1186/1758-2946-3-37 en
dc.identifier.volume 3 en
dc.identifier.startpage 37 en
dc.identifier.issn 1758-2946
dc.identifier.uri http://hdl.handle.net/10468/467
dc.identifier.doi 10.1186/1758-2946-3-37
dc.description.abstract Background The Blue Obelisk movement was established in 2005 as a response to the lack of Open Data, Open Standards and Open Source (ODOSOS) in chemistry. It aims to make it easier to carry out chemistry research by promoting interoperability between chemistry software, encouraging cooperation between Open Source developers, and developing community resources and Open Standards. Results This contribution looks back on the work carried out by the Blue Obelisk in the past 5 years and surveys progress and remaining challenges in the areas of Open Data, Open Standards, and Open Source in chemistry. Conclusions We show that the Blue Obelisk has been very successful in bringing together researchers and developers with common interests in ODOSOS, leading to development of many useful resources freely available to the chemistry community.   en
dc.description.sponsorship Health Research Board (PD/2009/13); National Cancer Institute, United States (HHSN261200800001E); National Institutes of Health, United States (HHSN261200800001E) en
dc.format.mimetype application/pdf en
dc.language.iso en en
dc.publisher Chemistry Central en
dc.relation.uri http://www.jcheminf.com/content/3/1/37
dc.rights © 2011 O'Boyle et al; licensee Chemistry Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. en
dc.rights.uri http://creativecommons.org/licenses/by/2.0/ en
dc.subject Open data en
dc.subject Open standards en
dc.subject Open source en
dc.subject Blue Obelisk en
dc.subject Chemical informatics en
dc.subject Computational chemistry analysis en
dc.subject Interoperability en
dc.subject.lcsh Open source software en
dc.subject.lcsh Chemistry--Computer programs en
dc.title Open data, open source and open standards in chemistry: The Blue Obelisk five years on en
dc.type Article (peer-reviewed) en
dc.internal.authorurl http://publish.ucc.ie/researchprofiles/C019/noboyle en
dc.internal.authorcontactother Noel O'Boyle, School Of Pharmacy, University College Cork, Cork, Ireland. +353-21-490-3000 Email: n.oboyle@ucc.ie en
dc.internal.availability Full text available en
dc.date.updated 2011-11-25T08:58:20Z
dc.description.version Published Version en
dc.internal.rssid 114582671
dc.contributor.funder Health Research Board en
dc.contributor.funder National Cancer Institute, United States en
dc.contributor.funder National Institutes of Health, United States en
dc.description.status Peer reviewed en
dc.identifier.journaltitle Journal of cheminformatics en
dc.internal.copyrightchecked Yes Article is CC-BY 2.0. RoMEO checked. en
dc.internal.licenseacceptance Yes en
dc.internal.IRISemailaddress n.oboyle@ucc.ie en


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© 2011 O'Boyle et al; licensee Chemistry Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Except where otherwise noted, this item's license is described as © 2011 O'Boyle et al; licensee Chemistry Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
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