Microbial therapeutics for infant gut health

dc.check.embargoformatEmbargo not applicable (If you have not submitted an e-thesis or do not want to request an embargo)en
dc.check.infoNot applicableen
dc.check.opt-outYesen
dc.check.reasonThis thesis contains data which has not yet been publisheden
dc.check.typeNo Embargo Required
dc.contributor.advisorO'Toole, Paul W.en
dc.contributor.advisorStanton, Catherineen
dc.contributor.advisorRyan, C. Anthonyen
dc.contributor.authorWatkins, Claire
dc.contributor.funderDepartment of Agriculture, Food and the Marineen
dc.contributor.funderUniversity College Corken
dc.date.accessioned2018-06-12T11:08:30Z
dc.date.available2018-06-12T11:08:30Z
dc.date.issued2018
dc.date.submitted2018
dc.description.abstractThe infant gut microbiota play an important role in the development of human health. This thesis outlines different areas where the infant gut can contribute as a source of microorganisms with the potential to benefit health. In addition, the use of microbial therapeutics is discussed to highlight how the infant gut can be nourished and supported by providing microbial species, such as Bifidobacterium species, to prevent the growth of potentially pathogenic organisms during this critical window of development. In Chapter 1.1, the importance of these Bifidobacterium is discussed in health and aging and in Chapter 1.2, additional examples of microbial therapeutics is discussed with a view towards early life disorders which have been associated with an altered or disturbed gut microbiome. In Chapter 2, the gut microbial impact of InfloranĀ©, a commercially available probiotic, is examined in a preterm infant cohort to assess the appropriate dosage required for administration in a neonatal care unit. A twice-daily dose of InfloranĀ© was found to significantly increase the relative abundance of bifidobacteria and was subsequently recommended as a suitable dosage for administration in this preterm infant group. In Chapter 3, the identification and characterisation of an infant gut derived, exopolysaccharide producing, Lactobacillus paracasei is discussed. The use of next-generation shotgun sequencing provided information on the genetic capabilities of the microorganism and identified several pathways involved in sugar metabolism. The use of this strain in yoghurt manufacturing was also assessed to identify the industrial potential of the microorganism. In Chapter 4, a novel, narrow-spectrum lantibiotic is discussed as a microbial therapeutic for reducing Group B Streptococcus (GBS) colonisation in pregnant woman and infants. In Chapter 5 this lantibiotic was subsequently compared to a bank of previously identified lantibiotics which exhibited antimicrobial activity against GBS. In Chapter 6, a unique case study examined the effects of therapeutic hypothermia treatment on the gut microbiota composition and metabolome of infants at 2 years of age, who had experienced hypoxic ischemic encephalopathy at birth.en
dc.description.statusNot peer revieweden
dc.description.versionAccepted Version
dc.format.mimetypeapplication/pdfen
dc.identifier.citationWatkins, C. 2018. Microbial therapeutics for infant gut health. PhD Thesis, University College Cork.en
dc.identifier.urihttps://hdl.handle.net/10468/6279
dc.language.isoenen
dc.publisherUniversity College Corken
dc.relation.projectUniversity College Cork (APC Microbiome Ireland)en
dc.rightsĀ© 2018, Claire Watkins.en
dc.rights.urihttp://creativecommons.org/licenses/by-nc-nd/3.0/en
dc.subjectGuten
dc.subjectInfanten
dc.subjectMicrobiomeen
dc.subjectProbioticsen
dc.thesis.opt-outtrue
dc.titleMicrobial therapeutics for infant gut healthen
dc.typeDoctoral thesisen
dc.type.qualificationlevelDoctoralen
dc.type.qualificationnamePhDen
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