Functional Annotation of All Salmonid Genomes (FAASG): an international initiative supporting future salmonid research, conservation and aquaculture

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dc.contributor.authorMacqueen, Daniel J.
dc.contributor.authorPrimmer, Craig R.
dc.contributor.authorHouston, Ross D.
dc.contributor.authorNowak, Barbara F.
dc.contributor.authorBernatchez, Louis
dc.contributor.authorBergseth, Steinar
dc.contributor.authorDavidson, William S.
dc.contributor.authorGallardo-Escarate, Cristian
dc.contributor.authorGoldammer, Tom
dc.contributor.authorGuiguen, Yann
dc.contributor.authorIturra, Patricia
dc.contributor.authorKijas, James W.
dc.contributor.authorKoop, Ben F.
dc.contributor.authorLien, Sigbjorn
dc.contributor.authorMaass, Alejandro
dc.contributor.authorMartin, Samuel A. M.
dc.contributor.authorMcGinnity, Philip
dc.contributor.authorMontecino, Martin
dc.contributor.authorNaish, Kerry A.
dc.contributor.authorNichols, Krista M.
dc.contributor.authorOlafsson, Kristinn
dc.contributor.authorOmholt, Stig W.
dc.contributor.authorPalti, Yniv
dc.contributor.authorPlastow, Graham S.
dc.contributor.authorRexroad, Caird E., III
dc.contributor.authorRise, Matthew L.
dc.contributor.authorRitchie, Rachael J.
dc.contributor.authorSandve, Simen R.
dc.contributor.authorSchulte, Patricia M.
dc.contributor.authorTello, Alfredo
dc.contributor.authorVidal, Rodrigo
dc.contributor.authorVik, Jon Olav
dc.contributor.authorWargelius, Anna
dc.contributor.authorYanez, Jose Manuel
dc.contributor.funderU.S. Department of Agriculture
dc.contributor.funderInternational Collaboration to Sequence the Atlantic Salmon Genome
dc.contributor.funderBiotechnology and Biological Sciences Research Council
dc.contributor.funderInnova Chile Committee
dc.contributor.funderCorporación de Fomento de la Producción
dc.contributor.funderGenome British Columbia
dc.contributor.funderNorwegian Seafood Research
dc.contributor.funderNorges Forskningsråd
dc.date.accessioned2017-09-26T11:39:19Z
dc.date.available2017-09-26T11:39:19Z
dc.date.issued2017
dc.description.abstractWe describe an emerging initiative - the 'Functional Annotation of All Salmonid Genomes' (FAASG), which will leverage the extensive trait diversity that has evolved since a whole genome duplication event in the salmonid ancestor, to develop an integrative understanding of the functional genomic basis of phenotypic variation. The outcomes of FAASG will have diverse applications, ranging from improved understanding of genome evolution, to improving the efficiency and sustainability of aquaculture production, supporting the future of fundamental and applied research in an iconic fish lineage of major societal importance.en
dc.description.sponsorshipBiotechnology and Biological Sciences Research Council (BB/P02582X/1)en
dc.description.statusPeer revieweden
dc.description.versionPublished Versionen
dc.format.mimetypeapplication/pdfen
dc.identifier.articleid484
dc.identifier.citationMacqueen, D. J., Primmer, C. R., Houston, R. D., Nowak, B. F., Bernatchez, L., Bergseth, S., Davidson, W. S., Gallardo-Escárate, C., Goldammer, T., Guiguen, Y., Iturra, P., Kijas, J. W., Koop, B. F., Lien, S., Maass, A., Martin, S. A. M., McGinnity, P., Montecino, M., Naish, K. A., Nichols, K. M., Ólafsson, K., Omholt, S. W., Palti, Y., Plastow, G. S., Rexroad, C. E., Rise, M. L., Ritchie, R. J., Sandve, S. R., Schulte, P. M., Tello, A., Vidal, R., Vik, J. O., Wargelius, A. and Yáñez, J. M. (2017) 'Functional Annotation of All Salmonid Genomes (FAASG): an international initiative supporting future salmonid research, conservation and aquaculture', BMC Genomics, 18, 484 (9pp). doi: 10.1186/s12864-017-3862-8en
dc.identifier.doi10.1186/s12864-017-3862-8
dc.identifier.issn1471-2164
dc.identifier.journaltitleBMC Genomicsen
dc.identifier.urihttps://hdl.handle.net/10468/4789
dc.identifier.volume18
dc.language.isoenen
dc.publisherBiomed Central Ltden
dc.relation.urihttps://bmcgenomics.biomedcentral.com/articles/10.1186/s12864-017-3862-8
dc.rights© 2017, the Author(s). Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver(http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.en
dc.rights.urihttps://creativecommons.org/publicdomain/zero/1.0/
dc.subjectSalmonid fishen
dc.subjectGenome biologyen
dc.subjectFunctional annotationen
dc.subjectComparative biologyen
dc.subjectStandardized data and metadataen
dc.subjectData sharingen
dc.subjectAquacultureen
dc.subjectWhole genome duplicationen
dc.subjectEvolutionen
dc.subjectPhenotypingen
dc.subjectAtlantic salmonen
dc.subjectRainbow trouten
dc.subjectOncorhynchus tshawytschaen
dc.subjectDNA methylationen
dc.subjectChIP-seqen
dc.subjectSalaren
dc.subjectEvolutionen
dc.subjectInsightsen
dc.subjectPopulationsen
dc.subjectResistanceen
dc.titleFunctional Annotation of All Salmonid Genomes (FAASG): an international initiative supporting future salmonid research, conservation and aquacultureen
dc.typeArticle (peer-reviewed)en
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